plotDispEsts-methods {DEXSeq}R Documentation

Diagnostic plot for dispersion estimates and dispersion fit

Description

This function generates a diagnostic plot showing the per-exon dispersion estimates and the fit of the dispersion-mean relation.

Usage

## S4 method for signature 'ExonCountSet'
plotDispEsts( object, ymin = NULL, cex = 0.45 )

Arguments

object

An ExonCountSet object.

ymin

The lower limit of the y axis. If NULL, a sensible value will be calculated.

cex

The cex parameter for plot.

Value

None. A plot is displayed.

Examples

   data("pasillaExons", package="pasilla")
   pasillaExons <- estimateSizeFactors( pasillaExons )
   pasillaExons <- estimateDispersions( pasillaExons )
   plotDispEsts( pasillaExons )
[Package DEXSeq version 1.8.0 Index]